DNA quantitation and quality check

Today I determined DNA yield for several samples that I had not yet tested with the Qubit. Here are the results (along with previous Nanodrop results), which can also be found in this spreadsheet:

Sample # Nanodrop DNA conc. (ng/ul) Qubit conc. (ng/ul) Sample volume Total DNA yield (ng)
past_100 7.36 2.28 200 456
past_1 19.06 11.3 200 2260
past_10 36.59 20 200 4000
past_97 7.56 too low 200
past_w11 179.65 35.2 50 1760
past_3 120.01 36.6 50 1830
past_2 223.21 99.4 50 4970
past_w1 437.86 330 50 16500
past_4 198.65 47.2 50 2360
past_w3 331.75 172 50 8600
past_5 193.93 77 50 3850
past_6 212.31 66.2 50 3310
past_7 229.16 27.4 50 1370
past_9 343.89 244 50 12200
past_8 106.39 37.6 50 1880
past_12 209.58 18.2 50 910

 

I also evaluated DNA quality on a gel for several samples. Here is the gel:

gel_022916

As can be seen here, some samples look pretty good, some look ok, and some look like crap. Why such a range? I have no idea, they were all preserved and extracted the same way. Past95 and past19 in particular are particularly bad. These samples should be re-extracted.

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